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HopkinsIDD
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COVIDScenarioPipeline
Public shared code for doing scenario forecasting and creating reports for various governmental entities.
GNU General Public License v3.0
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Slurm postprocess
#502
saraloo
opened
1 year ago
4
proof of concept of docker working form it's own directory
#501
jcblemai
opened
1 year ago
0
local_install.R fails on Docker version
#500
harryhoch
opened
1 year ago
2
Enable projection outside of the date range used for inference
#499
jcblemai
opened
1 year ago
0
inference: check if file exist before deleting it (for log sanity)
#498
jcblemai
opened
1 year ago
0
Add subsetting of locations capability
#497
shauntruelove
opened
1 year ago
0
Enable single population applications
#496
shauntruelove
closed
1 year ago
1
Remove hard-coded `geoid_len`
#495
shauntruelove
opened
1 year ago
0
Main diagnostics
#494
shauntruelove
closed
1 year ago
0
Batch submission revamp (slurm + post-process + ...)
#493
jcblemai
closed
1 year ago
1
Main addprocessing
#492
shauntruelove
closed
1 year ago
0
Main fix
#491
shauntruelove
closed
1 year ago
0
Bump setuptools from 47.3.1 to 65.5.1
#490
dependabot[bot]
closed
1 year ago
1
New submission system for SLURM & BATCH
#489
jcblemai
closed
1 year ago
0
Main flu into main
#488
jcblemai
closed
1 year ago
0
black --line-length 120 . --exclude renv*
#487
jcblemai
closed
1 year ago
1
Main flu subfix
#486
jcblemai
closed
1 year ago
0
Main flu into main
#485
jcblemai
closed
1 year ago
0
New submission system for SLURM & BATCH
#484
jcblemai
closed
1 year ago
0
Bump certifi from 2020.4.5.1 to 2022.12.7
#483
dependabot[bot]
closed
1 year ago
1
Done with config_testing
#482
HerambGupta
opened
2 years ago
0
Tests for config
#481
HerambGupta
closed
2 years ago
0
Main param timeseries inference fix
#480
jkamins7
closed
2 years ago
0
Fixed an issue with runs with no acceptances
#479
jkamins7
closed
2 years ago
0
Very ugly no data fix, do not merge
#478
jcblemai
closed
2 years ago
0
Fix hard coded path to "COVIDScenarioPipeline/local_install.R" in inference_runner.sh
#477
shauntruelove
closed
1 year ago
1
Testing Documentation
#476
HerambGupta
closed
2 years ago
0
Allow to load parameters as timeseries from files
#475
jcblemai
closed
2 years ago
0
Forgot to port the docker changes
#474
jkamins7
closed
2 years ago
0
Switched ci to trigger on main
#473
jkamins7
closed
2 years ago
0
Error logging
#472
jkamins7
closed
2 years ago
0
Continuation resume
#471
jkamins7
closed
2 years ago
0
Bump numpy from 1.18.2 to 1.22.0
#470
dependabot[bot]
closed
2 years ago
1
Chimeric reset pre merge
#469
jkamins7
closed
2 years ago
0
Update docker
#468
jkamins7
closed
2 years ago
0
Allow different shape for outcomes
#467
jcblemai
closed
2 years ago
0
Inference compdev merge
#466
jkamins7
closed
2 years ago
1
Capped the number of iterations per block at the number of total iter…
#465
jkamins7
closed
2 years ago
0
fixing non-us issue with fips
#464
jkamins7
opened
2 years ago
0
Continuation resume
#463
jkamins7
closed
2 years ago
0
Csp packaging hivepartitioning
#462
jkamins7
closed
2 years ago
0
updated DESCRIPTION with new pacakge requirements and version 1.0.0
#461
jkamins7
closed
2 years ago
0
Space efficient
#460
jkamins7
closed
2 years ago
0
Adding test for documentation
#459
HerambGupta
closed
2 years ago
0
Csp packaging gtfix merge
#458
jcblemai
closed
2 years ago
0
Updated packrat for shaun
#457
jkamins7
closed
2 years ago
0
Hive-partitioning stub, require big inference changes
#456
jcblemai
closed
2 years ago
0
Docker update for improved groundtruth
#455
jkamins7
closed
2 years ago
0
Config writer comp dev
#454
jcblemai
closed
2 years ago
0
gt fix
#453
jcblemai
closed
2 years ago
0
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