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HopkinsIDD / cholera-mapping-pipeline

Formerly part of cholera-taxonomy. The map creation scripts, packages, and file structure
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MDG 2016-20 #418

Open eclee25 opened 1 year ago

eclee25 commented 1 year ago

Set spatial_effect: 'no' - There are limited or no non-zero observations in this model

QLLZ commented 1 year ago

Updated config Data pull: HASH: f56d5a942b106ad7750b9be31c0456cefa5b6dc7

javierps commented 1 year ago

All 0s.

Ok to no-W run.

QLLZ commented 1 year ago

Config

Data pull:

HASH: 211913e0eb7d570ed62c48bc1ae9ecd6671a6cbc

Data pull failed log file

QLLZ commented 1 year ago

Data pull and model run (dev_taxdat_funs_fix branch):

HASH: 31f14227cd28a9824db72b7a6c45b0d65652872e

QLLZ commented 1 year ago

country data report

QLLZ commented 1 year ago

Convergency doesn't look good in one of the chains. but all zero case and modeled results look good.

Suggestion: accept.

eclee25 commented 1 year ago

0-case no-W model. Some convergence issues but not critical for this run. Approve

javierps commented 11 months ago

Sep 2023 Production run: convergence issues.

Suggestion: investigate further.

eclee25 commented 11 months ago

After removing the unused parameters from sampling, all diags look good. Approve