Open jcblemai opened 7 months ago
@shauntruelove I saw you assigned this issue to me and it's labeled as high priority, do we have a desired outcome and deadline for this since this is now high priority? I'm not super familiar with the details of this issue, @jcblemai or @shauntruelove would you be able to fill those in?
Notes:
@pearsonca @jcblemai I've attached the branch I'm doing the documentation updates to to this issue.
[twillard@longleaf-login6 ~]$ sg rc_jlessler_pi -c "touch foobar.txt"
[twillard@longleaf-login6 ~]$ ls -lah foobar.txt
-rw-r--r-- 1 twillard rc_jlessler_pi 0 Sep 13 11:25 foobar.txt
We need to ensure that everyone can access the run, so commands should be optionally run for a configurable certain group of user. su requires sudo, sg does not (edited)
Update as of EOD 2024-09-16:
flepiMoP
on Longleaf using the build/hpc_install.sh
script on the GH-191/longleaf-batch-submission
branch. Yet to add rockfish, pending access to be able to work through adding that as a supported cluster.GH-191/longleaf-batch-submission-documentation
branch--partition
to the batch/inference_job_launcher.py
script, see bba583a.
There are hardcoded paths and slurm loaded modules, these need to be provided as separate scripts -- that the user can override from its home directory, such that we can run on any slurm cluster