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HopkinsIDD / flepiMoP

The Flexible Epidemic Modeling Pipeline
https://flepimop.org
GNU General Public License v3.0
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stochastic option in config #43

Open alsnhll opened 1 year ago

alsnhll commented 1 year ago

The option to run stochastically vs deterministically should not be an environmental variable/command line input only but should also be in the config under integration::method (in addition to the deterministic methods rk4 and legacy)

shauntruelove commented 1 year ago

I agree with this. I added it as you said to the config, replacing rk4 in method

seir: integration: method: stochastic parameters: sigma: ...

Need to add it to the code to read the option still.