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HopkinsIDD / gavi_vimc_cholera

VIMC cholera model - estimating impact of oral cholera vaccine
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surveillance_pop_weighted_incid #60

Open Hanmeng-Xu opened 2 years ago

Hanmeng-Xu commented 2 years ago

' @name pop_weighted_admin_mean_incid

' @title pop_weighted_admin_mean_incid

' @description pop_weighted_admin_mean_incid

' @param datapath path to input data

' @param modelpath

' @param incidence_rate_raster

' @param pop_raster

' @param country

' @param admin_shp

' @return

' @export

' @include

  1. pop_raster and incidence_rate_raster should have the same extent;
  2. pop_for_weights and the incidence_rate_raster should have the same resolution;
  3. incidence rate in each admin should be between the max and min of the incidence rate within the shp of that admin.