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HumanBrainProject / neuroglancer-scripts

Conversion of neuroimaging data for display in Neuroglancer
MIT License
27 stars 18 forks source link

Add Gzip compresslevel option to FileAccessor and command line #26

Closed ylep closed 1 year ago

ylep commented 1 year ago

Continuation of https://github.com/HumanBrainProject/neuroglancer-scripts/pull/24

codecov[bot] commented 1 year ago

Codecov Report

Merging #26 (2bf2f8e) into master (6921f88) will increase coverage by 0.05%. The diff coverage is 100.00%.

@@            Coverage Diff             @@
##           master      #26      +/-   ##
==========================================
+ Coverage   92.40%   92.45%   +0.05%     
==========================================
  Files          25       25              
  Lines        1475     1485      +10     
  Branches      229      219      -10     
==========================================
+ Hits         1363     1373      +10     
  Misses         63       63              
  Partials       49       49
Impacted Files Coverage Δ
src/neuroglancer_scripts/accessor.py 100.00% <100.00%> (ø)
src/neuroglancer_scripts/file_accessor.py 100.00% <100.00%> (ø)
src/neuroglancer_scripts/utils.py 100.00% <0.00%> (ø)
src/neuroglancer_scripts/chunk_encoding.py 100.00% <0.00%> (ø)
src/neuroglancer_scripts/precomputed_io.py 100.00% <0.00%> (ø)

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ylep commented 1 year ago

@xgui3783 We could try adding python3.11, but the precompiled binaries are not available on pip for some dependencies, so setup requires some compilation, which I am not sure if it can run on the GitHub Actions Ubuntu image. Maybe worth giving a try...