HumanCellAtlas dcp-cli issues

HumanCellAtlas / dcp-cli

DEPRECATED - HCA Data Coordination Platform Command Line Interface

https://hca.readthedocs.io/

MIT License

6 stars 8 forks source link

issues

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[Snyk] Security upgrade setuptools from 40.5.0 to 70.0.0

#529 Fab-T opened 1 month ago
0
[Snyk] Security upgrade zipp from 3.15.0 to 3.19.1

#528 Bento007 opened 1 month ago
0
[Snyk] Security upgrade setuptools from 40.5.0 to 65.5.1

#527 Fab-T opened 6 months ago
0
Deprecate repository

#526 amarjandu closed 3 years ago
2
[Snyk] Security upgrade rsa from 4.5 to 4.7

#525 sbeara opened 3 years ago
0
Unable to login due to headers

#524 amarjandu opened 4 years ago
1
create sub-directories when downloading files with !

#523 amarjandu opened 4 years ago
1
Remove dss-prod from testing

#522 amarjandu closed 4 years ago
2
Fall back to copying when os.link raises error

#521 chmreid closed 4 years ago
6
Add symbolic links as alternative to hard links

#520 hannes-ucsc opened 4 years ago
1
Hard-link creation fails when downloading to NFS mounts

#519 fangpingmu closed 3 years ago
5
Develop script to restore the zarr directory structure following download

#518 theathorn closed 4 years ago
4
Close file handlers after use

#517 GPelayo closed 4 years ago
1
Order of arguments matters for `hca dss download-manifest`

#516 chmreid closed 4 years ago
7
Create subdirectories with `hca dss download-manifest --layout bundle`

#515 jessebrennan opened 4 years ago
1
Set version for gitdb2, a secondary dependency of Trufflehog

#514 achave11-ucsc closed 4 years ago
1
Close file handlers after use

#513 GPelayo closed 4 years ago
2
commit reordering attempt

#512 GPelayo closed 4 years ago
1
pin docutils in requirements.txt

#511 amarjandu closed 4 years ago
2
Pen testing build infrastructure

#510 GPelayo closed 4 years ago
2
Test Travis when creating PR from forked repo against parent repo

#509 GPelayo closed 4 years ago
0
Pen-test build infrastructure

#508 hannes-ucsc closed 4 years ago
0
Version numbers are inconsistent

#507 chmreid closed 4 years ago
1
Close file handlers after use

#506 GPelayo closed 4 years ago
1
Upload breaks if too many files (100+?)

#505 GPelayo closed 4 years ago
0
Remove references to query service

#504 MDunitz closed 4 years ago
1
[easy] Fix readme.rst links to API/CLI examples

#503 chmreid opened 4 years ago
1
Allow a user to specify file uuids in "upload()".

#502 DailyDreaming closed 4 years ago
2
login command says "address already in use" but does not provide useful information

#501 chmreid opened 4 years ago
1
post_search.iterate() iterator does not terminate cleanly

#500 chmreid opened 4 years ago
0
Allow user-specified bundle uuid for upload().

#499 DailyDreaming closed 4 years ago
2
Add `httpie` as dev requirement (#495)

#498 jessebrennan closed 4 years ago
1
hca dss refresh-swagger no longer exists.

#497 DailyDreaming opened 4 years ago
0
DSS: Verbose URLS

#496 amarjandu closed 4 years ago
1
Release script fails part way through

#495 jessebrennan closed 4 years ago
4
Rename bundle.json to bundle_manifest.json

#494 hannes-ucsc opened 4 years ago
1
Auth error.

#493 DailyDreaming opened 4 years ago
0
DSS Subscriptions: Callback Url

#492 amarjandu closed 4 years ago
1
Fix some progress bar tests failing silently

#491 natanlao closed 4 years ago
2
test_swagger_client_refresh is flaky

#490 jessebrennan opened 4 years ago
0
Rearrange new tutorials pages in sphinx documentation

#489 chmreid closed 4 years ago
0
Add a checkout sync operation.

#488 DailyDreaming closed 4 years ago
0
Refresh jwt using dcplib.

#487 DailyDreaming opened 4 years ago
0
Fix dss download docstring to use correct flags

#486 chmreid closed 4 years ago
1
dss download-manifest throws exceptions on duplicate files

#485 chmreid closed 4 years ago
5
Update version number to revert #476

#484 chmreid closed 4 years ago
1
Fix import dependencies

#483 DailyDreaming closed 4 years ago
2
Fix import dependencies.

#482 DailyDreaming closed 4 years ago
3
Downloading resources are wasted if threads are downloading the same file

#481 jessebrennan opened 4 years ago
0
Change flags starting with - to start with --

#480 chmreid closed 4 years ago
1