Fk remove zarr emptydrops snrna GL-1008

HumanCellAtlas / skylab

Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines

BSD 3-Clause "New" or "Revised" License

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Closed khajoue2 closed 4 years ago

khajoue2 commented 4 years ago

Updated optimus pipeline to not produce Zarr files and added empty_drop conditions for sn_rna mode

khajoue2 commented 4 years ago

Boolean output_loom = false

Yes, I will remove that, thanks!