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HumanCellAtlas
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table-testing
requirements, examples, and tests for expression matrix file formats
MIT License
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Add rbenchmarker --update
#19
mikejiang
opened
5 years ago
0
Add rbenchmarker
#18
mikejiang
closed
5 years ago
0
Add distributed filter and merge tests
#17
mckinsel
closed
5 years ago
0
WIP handle storing metadata in (or near) matrix files
#16
mckinsel
closed
5 years ago
0
Add benchmarks for merging remote files
#15
mckinsel
closed
5 years ago
0
Add contributing doc
#14
mckinsel
closed
6 years ago
1
Add tests for the merge task
#13
mckinsel
closed
6 years ago
2
Check the matrix output from tests
#12
mckinsel
closed
6 years ago
0
Consider separating "formats" concerns into "container" vs "domain"
#11
mckinsel
opened
6 years ago
1
Add netCDF to list of formats
#10
mckinsel
opened
6 years ago
0
Add zarr-chunking along first axis, based on (uncompressed) size
#9
ryan-williams
opened
6 years ago
3
Add documentation
#8
mckinsel
closed
6 years ago
1
Add script to run benchmark and add first test
#7
mckinsel
closed
6 years ago
0
Data creation docker and scripts
#6
mckinsel
closed
6 years ago
0
Suggestion to investigate - Parquet, which offers fast IO
#5
vals
opened
6 years ago
10
Another potential format for the list?
#4
rob-p
opened
6 years ago
0
Add docker containers and scripts to convert files to different formats
#3
mckinsel
closed
6 years ago
0
Benchmarks with GTEx data
#2
francois-a
opened
6 years ago
0
Test datasets
#1
mhemberg
opened
6 years ago
0