SHRD - Refactor PrepForLevelsInitialization to not require intermediate file

Huntsmanlab / utanos

Utilities for doing analysis on shallow WGS data

https://huntsmanlab.github.io/utanos/

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SHRD - Refactor PrepForLevelsInitialization to not require intermediate file #72

Open brandenjlynch opened 2 months ago

brandenjlynch commented 2 months ago

We currently create an intermediate file unnecessarily, which is created and read by PrepForLevelsInitialization. This should be refactored to be entirely in-memory.