SHRD - Make SHRD robust to other genomes

Huntsmanlab / utanos

Utilities for doing analysis on shallow WGS data

https://huntsmanlab.github.io/utanos/

Other

1 stars 0 forks source link

SHRD - Make SHRD robust to other genomes #73

Open brandenjlynch opened 2 months ago

brandenjlynch commented 2 months ago

Right now SHRD uses hard-coded regions (blacklist, centromeres, telomeres) for hg19. We should refactor this to cover at least hg38, and potentially also mm10.