Use roi from another segmentation tool ?

Hyojung-Choo / Myosoft

automated muscle histology analysis using machine learning algorithm utilizing FIJI/Image J software

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Use roi from another segmentation tool ? #2

Open quentin67100 opened 3 years ago

quentin67100 commented 3 years ago

Hello,

I would like to know if there is an easy way to use myosoft only for fiber typing? We do the segmentation with Cellpose that is very efficient and could work on our hpc servers, but we want to do fiber typing with the roi obtained from cellpose.

Thanks a lot