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Hyperdiverseproject / DeTox

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(snakemake port) remove sequences with X characters #5

Closed 54mu closed 1 year ago

54mu commented 1 year ago

we need a rule to remove sequences containing X characters. This might be user-defined, I'll set the default to 0

allanRin commented 1 year ago

Are you referring to repeating amino acids?

54mu commented 1 year ago

Are you referring to repeating amino acids?

no, undetermined aminoacids from transcripts containing N characters