Closed mfoll closed 4 years ago
Now that needlestack is basically a single process (+ split and merge) with piped commands (https://github.com/IARCbioinfo/needlestack/issues/147), the nextflow -resume option doesn't work because we move the output pdf here: https://github.com/IARCbioinfo/needlestack/blob/v1.1b/needlestack.nf#L428. We should rather copy them even if it uses a bit more disk space.
-resume
Now that needlestack is basically a single process (+ split and merge) with piped commands (https://github.com/IARCbioinfo/needlestack/issues/147), the nextflow
-resumeoption doesn't work because we move the output pdf here: https://github.com/IARCbioinfo/needlestack/blob/v1.1b/needlestack.nf#L428. We should rather copy them even if it uses a bit more disk space.