Source code for the MICCAI 2016 Paper "Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional NeuralNetworks and 3D Conditional Random Fields"
This is my code:
STEP1_DEPLOY_PROTOTXT = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step1/step1_deploy.prototxt"STEP1_MODEL_WEIGHTS = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step1/step1_weights.caffemodel"STEP2_DEPLOY_PROTOTXT = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step2/step2_deploy.prototxt"STEP2_MODEL_WEIGHTS = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step2/step2_weights.caffemodel" img=read_dicom_series("/home/mi/smj/myproject/Cascaded-FCN-master/test_image/3Dircadb1.17/PATIENT_DICOM/")lbl=read_liver_lesion_masks("/home/mi/smj/myproject/Cascaded-FCN-master/test_image/3Dircadb1.17/MASKS_DICOM/")
This is my code:
STEP1_DEPLOY_PROTOTXT = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step1/step1_deploy.prototxt"
STEP1_MODEL_WEIGHTS = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step1/step1_weights.caffemodel"
STEP2_DEPLOY_PROTOTXT = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step2/step2_deploy.prototxt"
STEP2_MODEL_WEIGHTS = "/home/mi/smj/myproject/Cascaded-FCN-master/models/cascadedfcn/step2/step2_weights.caffemodel"
img=read_dicom_series("/home/mi/smj/myproject/Cascaded-FCN-master/test_image/3Dircadb1.17/PATIENT_DICOM/")
lbl=read_liver_lesion_masks("/home/mi/smj/myproject/Cascaded-FCN-master/test_image/3Dircadb1.17/MASKS_DICOM/")
This is my result:
Why is result so bad?