Removal of Auto-sklearn

IBM / AutoXAI4Omics

Automated Explainable AI for Omics

Apache License 2.0

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Removal of Auto-sklearn #4

Open DrJStrudwick opened 5 months ago

DrJStrudwick commented 5 months ago

Dependabot detected a security issue, providing the solution to make scikit-learn >1.0.1. However Auto-sklearn pins it at version 0.24.2, supposidly it is on the development plane for v0.16 but development has slowed to a near stop (https://github.com/automl/auto-sklearn/issues/1597). Furthermore, this forces an older scikit-learn api to be used denying acces to new features, ultimately it will be for the best to remove this library.

DrJStrudwick commented 5 months ago

Tasks:

[x] remove auto-sklearn
[x] upgrade scikit-learn

DrJStrudwick commented 5 months ago

Discovered Eli5 is now restricting what version we can use (1.2.2, latest: 1.4.0) and is captured in #7

DrJStrudwick commented 5 months ago

Work for this is now completed and in dev just needs to be merged into main