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IC-FOODS / physical-activity-health-fitness

Physical Activity, Health and Fitness Knowledge Model
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Error: Failed to find a prefix name or keyword #1

Closed clairececchini closed 6 years ago

clairececchini commented 6 years ago

When running make on my ontology I get this error:

Chiaras-MacBook-Pro:ontology chiaracecchini$ make
/Users/chiaracecchini/ontology-starter-kit/bin/robot verify -i pahf-edit.owl --queries ../sparql/equivalent-classes-violation.sparql ../sparql/trailing-whitespace-violation.sparql ../sparql/owldef-self-reference-violation.sparql ../sparql/xref-syntax-violation.sparql ../sparql/nolabels-violation.sparql -O reports/
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by com.google.inject.internal.cglib.core.$ReflectUtils$2 (file:/Users/chiaracecchini/ontology-starter-kit/bin/robot.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain)
WARNING: Please consider reporting this to the maintainers of com.google.inject.internal.cglib.core.$ReflectUtils$2
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
ERROR [line: 1092, col: 48] Failed to find a prefix name or keyword: ’(8217;0x2019)
org.apache.jena.riot.RiotException: [line: 1092, col: 48] Failed to find a prefix name or keyword: ’(8217;0x2019)
    at org.apache.jena.riot.system.ErrorHandlerFactory$ErrorHandlerStd.fatal(ErrorHandlerFactory.java:136)
    at org.apache.jena.riot.lang.LangEngine.raiseException(LangEngine.java:163)
    at org.apache.jena.riot.lang.LangEngine.nextToken(LangEngine.java:106)
    at org.apache.jena.riot.lang.LangTurtleBase.triplesNode(LangTurtleBase.java:368)
    at org.apache.jena.riot.lang.LangTurtleBase.objectList(LangTurtleBase.java:350)
    at org.apache.jena.riot.lang.LangTurtleBase.predicateObjectItem(LangTurtleBase.java:288)
    at org.apache.jena.riot.lang.LangTurtleBase.predicateObjectList(LangTurtleBase.java:281)
    at org.apache.jena.riot.lang.LangTurtleBase.triples(LangTurtleBase.java:250)
    at org.apache.jena.riot.lang.LangTurtleBase.triplesSameSubject(LangTurtleBase.java:191)
    at org.apache.jena.riot.lang.LangTurtle.oneTopLevelElement(LangTurtle.java:47)
    at org.apache.jena.riot.lang.LangTurtleBase.runParser(LangTurtleBase.java:90)
    at org.apache.jena.riot.lang.LangBase.parse(LangBase.java:42)
    at org.apache.jena.riot.RDFParserRegistry$ReaderRIOTLang.read(RDFParserRegistry.java:185)
    at org.apache.jena.riot.RDFDataMgr.process(RDFDataMgr.java:906)
    at org.apache.jena.riot.RDFDataMgr.read(RDFDataMgr.java:257)
    at org.apache.jena.riot.RDFDataMgr.read(RDFDataMgr.java:231)
    at org.obolibrary.robot.QueryOperation.loadOntology(QueryOperation.java:40)
    at org.obolibrary.robot.VerifyCommand.execute(VerifyCommand.java:114)
    at org.obolibrary.robot.CommandManager.executeCommand(CommandManager.java:219)
    at org.obolibrary.robot.CommandManager.execute(CommandManager.java:161)
    at org.obolibrary.robot.CommandManager.main(CommandManager.java:121)
    at org.obolibrary.robot.CommandLineInterface.main(CommandLineInterface.java:53)
clairececchini commented 6 years ago

@mateolan can you please help on this one?

clairececchini commented 6 years ago

no longer giving error on the most recent version. Closing the issue