ICB-DCM / PESTO

PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
https://doi.org/10.1093/bioinformatics/btx676
BSD 3-Clause "New" or "Revised" License
26 stars 12 forks source link

var. min. error corrects + enhancements wrt. dfo algorithms, integration to pesto #167

Closed yannikschaelte closed 6 years ago

yannikschaelte commented 6 years ago

minor error corrects and enhancements w.r.t. the implemented dfo algorithms

errors: wrong name G_opt for gradient in performOptimization with RCS, in getMultiStarts gradient_opt not set in error catch

enhancements: rename optimizers and files to have just one name in use: dhc, rcs. improve catching erroneous user input for rcs,dhc options have just 1 list of all accepted optimizers in PestoOptions, use that for output (will be easier to avoid errors in the future this way...)