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ICB-DCM / parPE

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
MIT License
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PEtab: Fix initial state from condition table #408

Closed dweindl closed 2 weeks ago

dweindl commented 2 weeks ago

Initial state specified via the PEtab condition table was not always handled correctly when there was a NaN in condition table (meaning that the model value should be used).

The parameter mapping code here did not fully keep up with PEtab developments. Most of the required functionality is meanwhile available through AMICI. Use that instead of repeating everything here.

sonarcloud[bot] commented 2 weeks ago

Quality Gate Failed Quality Gate failed

Failed conditions
0.0% Coverage on New Code (required ≥ 80%)

See analysis details on SonarCloud