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ICGC-TCGA-PanCancer / CGP-Somatic-Docker

Dockerised and simplified version of SeqWare-CGP-SomaticCore
GNU Affero General Public License v3.0
14 stars 9 forks source link

Updates to WDL #7

Closed adamstruck closed 8 years ago

adamstruck commented 8 years ago

Also stripped out unused entries in CWL input files.

adamstruck commented 8 years ago

@denis-yuen clarified how the fields in the cwl json input was being used by dockstore. The path on the output files is used by dockstore after the workflow completes to determine where to copy the output files to.