IDR / omero-mkngff

Plugin to swap OMERO filesets with NGFF
GNU General Public License v2.0
0 stars 2 forks source link

Initial review #1

Open joshmoore opened 1 year ago

joshmoore commented 1 year ago
joshmoore commented 1 year ago
idr=# select * from originalfile order by id desc limit 30;
    id    | atime |          ctime          | permissions |                   hash                   |          mimetype          |          mtime          |          name          |                                           path                                           | size  | version | creation_id | external_id | group_id | owner_id | update_id | hasher |                 repo
----------+-------+-------------------------+-------------+------------------------------------------+----------------------------+-------------------------+------------------------+------------------------------------------------------------------------------------------+-------+---------+-------------+-------------+----------+----------+-----------+--------+--------------------------------------
 50485811 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zattrs                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/1/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485810 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zgroup                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/1/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485809 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zarray                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/1/1/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485808 |       |                         |         -56 |                                          | Directory                  |                         | 1                      | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/1/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485807 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zarray                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/1/0/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485806 |       |                         |         -56 |                                          | Directory                  |                         | 0                      | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/1/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485805 |       |                         |         -56 |                                          | Directory                  |                         | 1                      | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/     |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485804 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zattrs                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/0/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485803 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zgroup                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/0/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485802 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zarray                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/0/1/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485801 |       |                         |         -56 |                                          | Directory                  |                         | 1                      | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/0/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485800 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zarray                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/0/0/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485799 |       |                         |         -56 |                                          | Directory                  |                         | 0                      | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/0/   |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485798 |       |                         |         -56 |                                          | Directory                  |                         | 0                      | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/     |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485797 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zattrs                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/     |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485796 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zgroup                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/     |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485795 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zattrs                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/OME/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485794 |       |                         |         -56 |                                          | application/octet-stream   |                         | .zgroup                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/OME/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485793 |       |                         |         -56 |                                          | application/octet-stream   |                         | METADATA.ome.xml       | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/OME/ |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485792 |       |                         |         -56 |                                          | Directory                  |                         | OME                    | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/a.ome.zarr/     |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485791 |       |                         |         -56 |                                          | Directory                  |                         | a.ome.zarr             | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975_converted/                |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485790 |       |                         |         -56 |                                          | Directory                  |                         | 12-46-39.975_converted | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/                                       |       |         |   326138781 |             |        3 |        2 | 326138781 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485738 |       | 2023-06-22 12:46:41.018 |         -56 | f3e97f1f09d4241956301a1f3060302caa7a9e49 |                            | 2023-06-22 12:46:41.692 | a.fake.ini             | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975/                          |     9 |       0 |   326138714 |             |        3 |        2 | 326138717 |      6 | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485737 |       | 2023-06-22 12:46:41.018 |         -56 | da39a3ee5e6b4b0d3255bfef95601890afd80709 |                            | 2023-06-22 12:46:41.397 | a.fake                 | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/12-46-39.975/                          |     0 |       0 |   326138714 |             |        3 |        2 | 326138715 |      6 | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485736 |       |                         |         -56 |                                          | application/omero-log-file |                         | 12-46-39.975.log       | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/                                       | 45691 |       0 |   326138713 |             |        3 |        2 | 326138736 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485735 |       | 2023-06-22 12:46:40.399 |         -56 |                                          | Directory                  |                         | 12-46-39.975           | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/22/                                       |       |       0 |   326138711 |             |        1 |        2 | 326138711 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485734 |       | 2023-06-22 12:46:40.285 |         -56 |                                          | Directory                  |                         | 22                     | demo_2/Blitz-0-Ice.ThreadPool.Server-2/2023-06/                                          |       |       0 |   326138710 |             |        1 |        2 | 326138710 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485733 |       | 2023-06-22 12:46:40.023 |         -56 |                                          | Directory                  |                         | 2023-06                | demo_2/Blitz-0-Ice.ThreadPool.Server-2/                                                  |       |       0 |   326138709 |             |        1 |        2 | 326138709 |        | cdf35825-def1-4580-8d0b-9c349b8f78d6
 50485732 |       | 2023-06-16 11:58:35.873 |         -56 | 4301000000000000                         |                            | 2023-04-29 12:53:41     | .zarray                | demo_2/Blitz-0-Ice.ThreadPool.Server-4/2023-06/16/11-56-13.628/Week1_22123.zarr/G/5/1/2/ |   323 |       0 |   326091771 |             |        3 |        2 | 326096158 |      7 | cdf35825-def1-4580-8d0b-9c349b8f78d6