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IEDB
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TCRMatch
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TCRMatch Blank output
#56
trifle99
closed
4 weeks ago
5
Can we use TCRMatch to analyze BCR data
#55
tongyuBGI
closed
1 month ago
1
Query on Modified BLOSUM62
#54
pzhang84
closed
6 months ago
1
attempting fix for push to harbor
#53
jgbaum
closed
9 months ago
0
Possible to have TCRMatch ignore invalid CDR3s?
#52
bcorrie
closed
10 months ago
2
Installation error
#51
parvathisudha
closed
10 months ago
4
Running TCRMatch with incomplete CDR3 sequences
#50
seunghun23
closed
11 months ago
1
Is it possible to install TCR match on MacOS Monterey Version 12.2.1?
#49
gianmore
opened
1 year ago
7
Does TRCmatch works with DNN
#48
saramoein372
opened
1 year ago
2
Feature/unit testing
#47
acrinklaw
closed
1 year ago
4
Subject: Including the <sstream> header to resolve stringstream-related compilation errors
#46
thekingofall
closed
1 year ago
2
CEDAR
#45
saramoein372
closed
1 year ago
3
Add more unit tests using Catch2
#44
acrinklaw
closed
1 year ago
0
Buggy results when compiled with Intel oneAPI DPC++/C++ Compiler
#43
raphaeltrevizani
closed
1 year ago
7
Release 1.1
#42
jgbaum
opened
1 year ago
1
Trust4
#41
raphaeltrevizani
closed
1 year ago
0
output is a 3 column file
#40
crisjs
closed
1 year ago
6
1.0.3
#39
acrinklaw
closed
1 year ago
0
IEDB data files need to be versioned somehow for provenance
#38
schristley
opened
1 year ago
0
please add a version number output
#37
schristley
closed
10 months ago
3
Which species does TCRMatch work with?
#36
canuckafar
closed
1 year ago
1
added option to trim
#35
raphaeltrevizani
closed
2 years ago
0
Score filtering looks inconsistent
#34
catsutherland
closed
2 years ago
2
empty output
#33
alxndravc
closed
2 years ago
2
Fix harbor.yml Github Action
#32
acrinklaw
closed
1 year ago
1
Add trimming of C and F/W amino acids from input CDR3 sequences by default
#31
wchronister
closed
2 years ago
2
Unify Python and C++ scripts into a single C++ script
#30
acrinklaw
closed
2 years ago
3
Unify the process output python + tcrmatch.cpp files
#29
acrinklaw
closed
2 years ago
5
No headers on output
#28
danielmarrama
closed
2 years ago
1
Airr tsv format
#27
schristley
closed
2 years ago
0
support for AIRR TSV input
#26
schristley
closed
2 years ago
1
Add output file logic
#25
acrinklaw
closed
2 years ago
5
Harbor Credentials
#24
acrinklaw
closed
2 years ago
2
similarity metric threshold cannot exceed 1, but runs anyway, also negative numbers
#23
danielmarrama
closed
2 years ago
1
Cannot run "tcrmatch" executable from different directory
#22
danielmarrama
closed
2 years ago
9
output should be in various formats specified
#21
danielmarrama
closed
2 years ago
2
# of threads input doesn't account for negative numbers or decimals
#20
danielmarrama
closed
2 years ago
2
update process_output.py with argparse
#19
danielmarrama
closed
2 years ago
2
Create harbor.yml
#18
acrinklaw
closed
2 years ago
1
TCR sequences import
#17
vercanie
closed
2 years ago
3
Add argparse for Python script
#16
acrinklaw
closed
2 years ago
0
Add shebang to Python script
#15
acrinklaw
closed
2 years ago
0
Compilation issues
#14
ulloaa
closed
2 years ago
5
Add -d parameter for database location
#13
acrinklaw
closed
2 years ago
0
Allow process_output.py to have relative paths
#12
acrinklaw
closed
2 years ago
0
Add boolean param for IEDB receptor group
#11
acrinklaw
closed
2 years ago
0
Add Dockerfile
#10
acrinklaw
closed
2 years ago
0
Increase portability and compatibility
#9
acrinklaw
closed
2 years ago
0
compile error
#8
tianshilu
closed
3 years ago
19
Add proper CI and unit testing for future builds
#7
acrinklaw
closed
1 year ago
1
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