IGS / gEAR

The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
https://umgear.org
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include inner ear MPSS library to gEAR #329

Open songeric1107 opened 2 years ago

songeric1107 commented 2 years ago

request from a user.

"one of the earliest RNAseq datasets although that is not what these 20 nt tags of mRNA were categorized as in 2007"

songeric1107 commented 2 years ago
TISSUE Count of DATASET
Adrenal 2
Bladder 2
Bone 2
Brain 20
Brown Fat 2
Cartilage 2
Cervix and vagina 1
Embryo E18 1
Esophagus 2
Eye 2
Heart 6
Kidney 4
Large intestine 2
Liver 3
Lung 2
Lymph nodes 2
Mammary gland 1
Mouse Brain 4
Mouse ES cells 2
Ovary 1
Pituitary 2
Placenta - E18 1
Prostate 1
SkeletalMuscle 2
Skin 2
Small intestine 2
Spinal cord 2
Spleen 2
Stomach 1
Testis 1
Thymus 2
Thyroid/parathyroid 2
Uterus 2
White fat 2

- how to aggregate the value for the same "nucleic sequencing"? using SUM?

Screen Shot 2022-06-01 at 10 43 59 AM

RLC-DCPPC commented 2 years ago

https://allometra.com/mpss.shtml

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC514116/