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IGS / gEAR

The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
https://umgear.org
GNU Affero General Public License v3.0
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Possibly add new analysis tool scDRS #486

Open RLC-DCPPC opened 1 year ago

RLC-DCPPC commented 1 year ago

https://github.com/martinjzhang/scDRS

brianherb commented 1 year ago

If anyone is interested, there is a new program that takes GWAS summary statistics and calculates a relevance score for each cell of a given single cell dataset (in other words, identify which cells are expressing GWAS-associated genes). The paper is here, and the GitHub page here describes the software.

If there are some relevant hearing GWAS studies that we want to apply to some single cell datasets within gEAR, this program could help identify cell types expressing risk genes.

RLC-DCPPC commented 1 year ago

Brian to present quick intro to this effort on 1/11.