Previously, we included all annotations from import modules, but I think this brought in a lot of unnecessary data. The gizmos.extract module has been updated to handle subsets of annotations, so I think it would be good to utilize this feature.
This PR is a proposal to remove unnecessary annotation properties and only include the following from imports:
ID
Label
IAO:0000112
example of usage
IAO:0000115
definition
IAO:0000118
alternative term
IAO:0000119
definition source
oboInOwl:hasAlternativeId
has_alternative_id
oboInOwl:hasBroadSynonym
has_broad_synonym
oboInOwl:hasExactSynonym
has_exact_synonym
oboInOwl:hasNarrowSynonym
has_narrow_synonym
oboInOwl:hasRelatedSynonym
has_related_synonym
rdfs:comment
comment
rdfs:label
label
The following are the annotation properties removed. I'm happy to add any of these back in if they are relevant.
Previously, we included all annotations from import modules, but I think this brought in a lot of unnecessary data. The
gizmos.extract
module has been updated to handle subsets of annotations, so I think it would be good to utilize this feature.This PR is a proposal to remove unnecessary annotation properties and only include the following from imports:
The following are the annotation properties removed. I'm happy to add any of these back in if they are relevant.