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IHCC-cohorts / GECKO

Genomics Cohorts Knowledge Ontology
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gizmos 0.1.1 -> 0.1.4 #45

Closed theisuru closed 3 years ago

theisuru commented 3 years ago

Fix for make fail with following error message because of old gizmos dependency

python3 -m gizmos.extract -d build/imports/bfo.db -T build/imports/bfo.txt -P build/annotations.txt -n > build/imports/bfo.ttl
usage: extract.py [-h] -d DATABASE [-t TERM] [-T TERMS] [-a ANNOTATION]
                  [-A ANNOTATIONS] [-n]
extract.py: error: unrecognized arguments: -P build/annotations.txt