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IHEC / ihec-ecosystems

This repo is for code and documentation associated with the ihec-ecosystems working group
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Molecule type #73

Closed dzerbino closed 4 years ago

dzerbino commented 4 years ago

2 years ago we added the following statement to the experiment spec:

In order to pass IHEC metadata validation, all datasets submitted prior to 2018 must include the following properties:

  • LIBRARY_STRATEGY
  • EXPERIMENT_TYPE or EXPERIMENT_ONTOLOGY_URI
  • MOLECULE or MOLECULE_ONTOLOGY_URI, either defined in the experiment or sample object.

Should this not apply to submissions post 2018?

sitag commented 4 years ago

@dzerbino post 1.0 everything is required, so this is implicit.

dzerbino commented 4 years ago

OK, can this now be rephrased to:

In order to pass IHEC metadata validation, all datasets submitted must include the following properties:

LIBRARY_STRATEGY EXPERIMENT_TYPE or EXPERIMENT_ONTOLOGY_URI MOLECULE or MOLECULE_ONTOLOGY_URI, in the experiment object (or the sample object for datasets prior to 2018).