FULL Import Failure on Snowstorm 9.2.0

IHTSDO / snowstorm

Scalable SNOMED CT Terminology Server using Elasticsearch

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FULL Import Failure on Snowstorm 9.2.0 #575

Closed eiriknicholas closed 7 months ago

eiriknicholas commented 11 months ago

Hi, I am experiencing a problem when trying to upload the full version of SNOMED CT using Snowstorm version 9.2.0:

java -Xms2g -Xmx4g -jar snowstorm-9.2.0.jar --delete-indices --import-full=SnomedCT_InternationalRF2_PRODUCTION_20230901T120000Z.zip

The upload process fails, and the following error is logged: FULL import is only implemented for the MAIN branch and when there is no existing content.

Environment

Snowstorm Version: 9.2.0
Elasticsearch Version: 7.17.16
Java Version: 17
OS: Windows 11

I'm wondering if there's a workaround or a fix that I might have missed. Any pointers or guidance would be greatly appreciated!

Best regards, Eirik

CoderMChu commented 11 months ago

@eiriknicholas This bug is fixed in develop (https://github.com/IHTSDO/snowstorm/commit/32b83f4e122e47ed9e7849eb1cf5161ce360a9a8). Unfortunately in 9.2.0 you can use --import option for snapshot import only. Note ES8 is required if you use develop branch.

eirikconteir commented 11 months ago

Thank you so much, @CoderMChu ! We'll try to run a test using the develop branch.

That said, we're not going to production with something build on a dev-branch for our customers:) Do you have an (gu)estimate for when this fix will be pulled into master?

Best from Oslo, Norway,

(another) Eirik

CoderMChu commented 11 months ago

@eirikconteir It will be towards the end of February next year unfortunately.

CoderMChu commented 11 months ago

@eirikconteir For a workaround you can update containsContent=false for the latest MAIN branch document via kibana before full import and set it to true afterwards.

eirikconteir commented 11 months ago

Thanks a lot, @CoderMChu ! If a production installation is urgent, we'll go with the workaround. If not, we patiently wait:)

This issue is from our perspective closed. Again, thank you so much for your support!

eirikconteir commented 9 months ago

Hi again, @CoderMChu ! After upgrading to 10.1 FULL import works:)

But another issue appeared for the browser: After creating a third level code system (MAIN/SNOMEDCT-NO/CONTEIR) the browser stoped working

Does this make any sense to you?

CoderMChu commented 9 months ago

@eirikconteir Sorry to hear that you have got another issue. The error seems to be related to ecl-builder-ui component. Can you please raise an issue in https://github.com/IHTSDO/ecl-builder-ui? Thanks.