IRI column in input - Githubissues

INCATools / dead_simple_owl_design_patterns

A simple system for specifying OWL class design patterns for OBO-ish ontologies.

http://incatools.github.io/dead_simple_owl_design_patterns/

GNU General Public License v3.0

43 stars 5 forks source link

IRI column in input #30

Closed balhoff closed 7 years ago

balhoff commented 7 years ago

Is the name of the IRI column in the input CSV standardized by the spec? I've seen iri, and @cmungall recommended defined_class at one point. This could also be command line option.

cmungall commented 7 years ago

Not AFAIAW.

defined_class may be too restrictive. DPs can also provide SubClassOf axioms, no Equiv Axioms. And with instance patterns, the IRI may be an OWL Individual.

Another option is to privilege col1/2 by default

dosumis commented 7 years ago

Broader issue is spec for tsv input. I've avoided putting this on DOSDP up to now, considering this an issue for implementations, but perhaps that was silly.

[x] TODO add a simple doc with TSV spec. Needs: header name for IRI column; spec for how to delimit lists. Anything else? Optional column to overide label in pattern?

dosumis commented 7 years ago

See #38