INCATools / dead_simple_owl_design_patterns

A simple system for specifying OWL class design patterns for OBO-ish ontologies.
http://incatools.github.io/dead_simple_owl_design_patterns/
GNU General Public License v3.0
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Fixed #32 #36

Closed dosumis closed 6 years ago

dosumis commented 7 years ago

Some patterns specify narrow synonyms, +ve reg has:

var synonyms = termgenie.synonyms([ "positive regulation of ",
    "up regulation of ", "up-regulation of ", "upregulation of ", "activation of " ],
    ["EXACT", "EXACT", "EXACT", "EXACT", "NARROW" ],
    x, go, [], label);

To support this we should change draft spec to have variants: generated_exact_synonyms; generated_narrow_synonyms etc

(Note: js function is much less verbose (and more OBO-ish) than dosdp here. But synonym type mapping in OWL makes this OBO-ish syntax hard to build on the DOSDP basic spec.)

dosumis commented 7 years ago

CC @balhoff @cmungall