INCATools / ontology-development-kit

Bootstrap an OBO Library ontology
http://incatools.github.io/ontology-development-kit/
BSD 3-Clause "New" or "Revised" License
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Fix use of ODK_BINDS option. #1050

Closed gouttegd closed 5 months ago

gouttegd commented 5 months ago

The run.sh script is supposed to allow specifying extra bindings between the local filesystem and the container, with a ODK_BINDS option in the run.sh.conf file:

ODK_BINDS=/path/to/my/local/dir:/path/to/the/container/mount/point

This currently doesn't work when using the Docker (standard) backend because of a single missing g option to the sed command that converts the value of ODK_BINDS into -v options to pass to docker run.

This PR simply adds the missing g option.