INCATools / ontology-development-kit

Bootstrap an OBO Library ontology
http://incatools.github.io/ontology-development-kit/
BSD 3-Clause "New" or "Revised" License
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Video Tutorial Series for Ontology Curation and release management with Robot, DOSDP and ODK #206

Closed matentzn closed 1 year ago

matentzn commented 5 years ago

It becomes increasingly important to train curators to write basic QC components for their ontologies, release their ontology using the ODK and managing their definitions using the DOSDP pattern system. With Robot, it has become easier than ever to write your own QC modules and fiddle them into the release pipeline.

I propose a joint OBO-Monarch seminar series with short video tutorials covering the most important use cases for curation, release management, quality control and pattern based development. I am happy to do the actual recordings, but I would like some help with the following tasks:

  1. Collecting the most common scenarios for which it would be beneficial to record a tutorial
  2. Managing a bespoke Youtube or whatever channel to manage the series
  3. Produce the videos (I would supply raw recordings, which would need to be could and merged and get some kind of OBO/Monarch/ROBOT credits thingy in the end).

What do you think?

LCCarmody commented 5 years ago

Yes, definitely. Obsoleting (terms, synonyms, etc), merging, developing patterns, the difference between in part and in part of ;), and building ontologies are among the tops of my list.

jpgourdine commented 5 years ago

Yes, it will be helpful.

diatomsRcool commented 5 years ago

I would definitely use such a thing. Maybe drafting a "cheat sheet"?

chris-grove commented 5 years ago

Yes, this would certainly be helpful. In particular, QC components, ontology building best practices, ODK basics, pattern development, and how patterns are used to infer desired tree outputs after reasoning (to better design patterns intentionally)

beckyjackson commented 5 years ago

+1 - and happy to help with the ROBOT tutorial materials. 😄

nicolevasilevsky commented 5 years ago

Yes, I love this idea and am happy to help.

sbello commented 5 years ago

Love this idea and am happy to be a test user

matentzn commented 5 years ago

@nicolevasilevsky @monicacecilia

I like Camtasia, and even have an old license. It costs around 300 quit though, and I believe iMovie for Mac may be sufficient for us. Maybe we can start a very crude workflow like this. We both have iMovie installed. We have a shared dropbox. I create a folder for each tutorial, and create a very preliminary arrangement in iMovie. Save it in folder. Ping you. Then you go and cut and clean it, and post it somewhere (I would like a bespoke youtube channel for that). As Monarch pays for this and the tooling is OBO foundry, I would like a 3-second credit slide in the end with the Monarch and OBO foundry logos and a suitable blurp that assigns credit. Shall we try that @nicolevasilevsky ?

matentzn commented 5 years ago

We can start with 3 test videos, get some feedback from @sbello and @chris-grove and iterate until we find a style that works.

monicacecilia commented 5 years ago

@matentzn @nicolevasilevsky Alright. Let's give it a try with iMovie. In my experience, the best way to create a tutorial is:

  1. Start with a script: type everything you want to say and how you want to emphasize it.
  2. Either prepare a screen recording or still images to tell that story.
  3. Record the voice over separately - quiet room, use mic, and in the absence of a sound booth, place a piece of cloth over your head to make it a 'dry' sound.
  4. Edit content together and do a happy dance. :bowtie:
  5. Edit: Make it short, up to 3 minutes in length. Edit: here is a simple, useful tutorial video.

I have not used iMovie, but I imagine it may work similarly to Camtasia - (btw, I think the @cmungall Lab has licenses; perhaps we could use one for Monarch work). @nicolevasilevsky, please let me know if I can help getting you started. 🎥

cmungall commented 5 years ago

No license, sorry!

monicacecilia commented 5 years ago

ack! too bad. 😞 thanks for checking!

nicolevasilevsky commented 5 years ago

@monicacecilia - yes, some help with iMovie would be great. Should we wait until @matentzn has created some videos for us to edit?

@matentzn if you would like help writing the scripts, let me know

matentzn commented 1 year ago

This has been realised largely by OBOOK. No further action required.