INCATools / ontology-development-kit

Bootstrap an OBO Library ontology
http://incatools.github.io/ontology-development-kit/
BSD 3-Clause "New" or "Revised" License
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Ensure that run.sh defaults to ODK_USER_ID=0 #956

Closed matentzn closed 5 months ago

matentzn commented 7 months ago

This is using todays dev release

docker pull obolibrary/odkfull:dev

Running

ODK_TAG=dev ./run.sh make prepare_release

Results in permission errors while

ODK_TAG=dev ODK_USER_ID=0 ./run.sh make prepare_release

works as expected.

cat /etc/os-release
NAME="AlmaLinux"
VERSION="8.9 (Midnight Oncilla)"
ID="almalinux"
ID_LIKE="rhel centos fedora"
VERSION_ID="8.9"
PLATFORM_ID="platform:el8"
PRETTY_NAME="AlmaLinux 8.9 (Midnight Oncilla)"
ANSI_COLOR="0;34"
LOGO="fedora-logo-icon"
CPE_NAME="cpe:/o:almalinux:almalinux:8::baseos"
HOME_URL="https://almalinux.org/"
DOCUMENTATION_URL="https://wiki.almalinux.org/"
BUG_REPORT_URL="https://bugs.almalinux.org/"

ALMALINUX_MANTISBT_PROJECT="AlmaLinux-8"
ALMALINUX_MANTISBT_PROJECT_VERSION="8.9"
REDHAT_SUPPORT_PRODUCT="AlmaLinux"
REDHAT_SUPPORT_PRODUCT_VERSION="8.9"

I double checked, dev is up to date with master, and the dev branch I used to build is up to date with origin.

matentzn commented 7 months ago

@matentzn to make a proper self-contained test for this and see if the same thing works on ubuntu but fails on alma.

matentzn commented 7 months ago
matentzn commented 5 months ago

I have tested this on two independent machines and cant replicate the problem anymore.. Must have been that I was not on the latest version.