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INCATools / ubergraph

Integrated OBO ontology store
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Odd URLs for CL, UBERON identifiers #155

Closed gaurav closed 3 weeks ago

gaurav commented 3 weeks ago

I found a bunch of URLs on Ubergraph that don't really make sense to me:

- www.jcvi.org [95]
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_0000128
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_0000129
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_0000679
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_0002453
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_0002605
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_0010011
   - http://www.jcvi.org/framework/nsf2_full_mtg#CL_1001602
   - http://www.jcvi.org/framework/nsf2_full_mtg#UBERON_0002771
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000001
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000002
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000003
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000004
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000005
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000006
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000007
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000008
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000009
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000010
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000011
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000012
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000013
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000014
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000015
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000016
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000017
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000018
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000019
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000020
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000021
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000022
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000023
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000024
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000025
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000026
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000027
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000028
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000029
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000030
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000031
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000032
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000033
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000034
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000035
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000036
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000037
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000038
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000039
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000040
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000041
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000042
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000043
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000044
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000045
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000046
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000047
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000048
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000049
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000050
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000051
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000052
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000053
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000054
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000055
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000056
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000057
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000058
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000059
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000060
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000061
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000062
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000063
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000064
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000065
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000066
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000067
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000068
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000069
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000070
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000071
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000072
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000073
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000074
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000075
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000076
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000077
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000078
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000079
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000088
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000091
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000092
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000093
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000094
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000095
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000096
   - http://www.jcvi.org/framework/nsf2_full_mtg#pCL_0000097

I think they might be CL and UBERON terms being mapped to the wrong URL. Do you know what's going on here?

balhoff commented 3 weeks ago

These come from PCL. All the ones I looked at are marked obsolete. I think these refers to CL and UBERON for their own purposes but are not CL and UBERON identifiers.