search

INCATools / ubergraph

Integrated OBO ontology store
BSD 3-Clause "New" or "Revised" License
43 stars 3 forks source link

GRLC query - map2slim #56

Closed ubyndr closed 2 years ago

ubyndr commented 2 years ago

Fixes #52 David requested a API to create subset with given term list, lists are supported with grlc yet. We decided go with mapping a single term rather than a term list for now.

dosumis commented 2 years ago

@cmungall @balhoff - This is a rather simple version of map 2 slim that maps only one term at a time across one edge type. Future versions may be more fully featured (multiple relations, multiple terms) but this will require GRLC functionality that is not yet available. This simple version is still useful for taking advantage of ubergraph materialization to ensure that results are complete for the relation specified. This is particularly useful for Uberon given the many subrelations of part_of it uses.