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INCF / HAWG-examples

HAWG example JSON files
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create text file to JSON converter for simple examples. #7

Open andrewjanke opened 8 years ago

andrewjanke commented 8 years ago

Need a simple converter for text file atlas descriptions to JSON

sujeet14108 commented 8 years ago

Is this issue still open?

andrewjanke commented 8 years ago

Yes, still open.

sujeet14108 commented 8 years ago

What exactly needs to done in this? Simple text file to JSON format converter in JAVA ?

andrewjanke commented 8 years ago

The idea is to create a converter that will take an input text file (likely space delimited) and convert it to JSON format. I've put one text file example here:

https://github.com/INCF/HAWG-examples/tree/master/text-examples

But there will be variation in how things are defined. The JSON format is still evolving but here is the current best example:

https://github.com/INCF/HAWG-examples/blob/master/mouse-development-example.json

Obviously there will not be enough information in the text file to populate all of this. The implementation language should be python. It's probably best to wait until the JSON format stabilises before doing too much work on this.

sujeet14108 commented 8 years ago

Although text file didn't gave much as pointed by you but i understood the idea. So waiting till confirmation about the stable JSON format.

markj789 commented 8 years ago

I tried to upload a couple of Harvard-Oxford text examples using the "New File" option in the web interface but I think it just forked and sent a pull request. @Andrew - can you get these into the master for everyone to see?

andrewjanke commented 8 years ago

Have done.

It seems you forked to markj789 and then updated. So I created a pull request from this and merged.

markj789 commented 8 years ago

Thanks. The web interface made me do it this way! MJ

From: Andrew Janke notifications@github.com<mailto:notifications@github.com> Reply-To: INCF/HAWG-examples reply@reply.github.com<mailto:reply@reply.github.com> Date: Wednesday, 24 February 2016 01:31 To: INCF/HAWG-examples HAWG-examples@noreply.github.com<mailto:HAWG-examples@noreply.github.com> Cc: Mark Jenkinson mark@fmrib.ox.ac.uk<mailto:mark@fmrib.ox.ac.uk> Subject: Re: [HAWG-examples] create text file to JSON converter for simple examples. (#7)

Have done.

It seems you forked to markj789 and then updated. So I created a pull request from this and merged.

— Reply to this email directly or view it on GitHubhttps://github.com/INCF/HAWG-examples/issues/7#issuecomment-188001279.