Project: NIH CAFE

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Overview

Activities and tasks related to our participation in the NIH CAFE project. Work includes biomedical metadata support and geospatial support and data curation.

Development Issues

Pending

• [ ] https://github.com/IQSS/dataverse/issues/10398
• [ ] https://github.com/IQSS/dataverse/issues/10194
• [ ] https://github.com/IQSS/dataverse.harvard.edu/issues/267
• [ ] https://github.com/IQSS/dataverse/issues/10476
• [ ] https://github.com/IQSS/dataverse.harvard.edu/issues/265
• [ ] https://github.com/IQSS/dataverse/issues/10576
• [ ] https://github.com/IQSS/dataverse/issues/10577
• [ ] https://github.com/IQSS/dataverse.harvard.edu/issues/32

Complete

• [x] https://github.com/IQSS/dataverse/issues/9384
• [x] https://github.com/IQSS/dataverse/issues/8134
• [x] https://github.com/IQSS/dataverse.harvard.edu/issues/244
• [x] https://github.com/IQSS/dataverse/issues/10385
• [x] https://github.com/IQSS/dataverse/issues/10397
• [x] https://github.com/IQSS/dataverse/issues/9798

Related

• https://github.com/IQSS/dataverse-pm/issues/157 (closed on 2024/03/20, in favor of current tracking issue)
• https://github.com/IQSS/dataverse-HDV-Curation/issues/500

Resources

• Customization and Improvement of Dataverse for the CAFE Project

• Google Drive Folder

  Curation Issues

  Pursuing Collaborations with:

• http://wellcome.org/
• https://openclimatecampaign.org/

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March 2024

The following issue was completed:

• https://github.com/IQSS/dataverse/issues/8134

Additional issues were identified and added for future sprints:

• https://github.com/IQSS/dataverse/issues/10385
• https://github.com/IQSS/dataverse/issues/10397
• https://github.com/IQSS/dataverse/issues/10398
• https://github.com/IQSS/dataverse/issues/10194

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April 2024

Development

• A new document Customization and Improvement of Dataverse for the CAFE Project was created to capture and address user feedback from the CAFE team.

Additional issues created for future sprints. Sizing underway:

• https://github.com/IQSS/dataverse.harvard.edu/issues/267
• https://github.com/IQSS/dataverse/issues/10476
• https://github.com/IQSS/dataverse/issues/10502
• https://github.com/IQSS/dataverse.harvard.edu/issues/265

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May 2024

• https://github.com/IQSS/dataverse/issues/10576
• https://github.com/IQSS/dataverse/issues/10577
• Alexis': Monthly Summary - May 2024

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Status: June 2024

Curation

• Finalized the CAFE acquisition template this month and have sent out 12 Acquisition Letters (still pending),
• 4 new Datasets have been shared through CAFE,
• Generating statistics and identifying key datasets from the HDR every month for the CAFE newsletter
• The team is planning a meeting in July to discuss a website revamp
• The team is focused on identifying tutorials that have been created by other organizations but are also relevant to CAFE that can be shared on the CAFE website/GitHub

  Development

• Alexis' Monthly Summary - June 2024

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Status: July 2024

Curation

• https://github.com/IQSS/dataverse.harvard.edu/issues/287
• https://github.com/IQSS/dataverse/issues/10693
• 7 more Acquisition letters were sent out
• 3 new Datasets have been shared through CAFE
• Website requirements were collected during the revamp meeting to be delivered to website development team
• We created a template that is undergoing review to share NIH funded research projects through CAFE, this includes P20 grant funded projects as well as other NIH funded projects
• The newsletter this month featured a more targeted blurb to push for additional contributions from the climate and health community
• The team met with Stefano earlier today and reached a consensus to use CAFE as both a repository and a catalogue, and will include a way to easily filter datasets accordingly

  Development

• Alexis' Monthly Summary - July 2024

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Status: August 2024

• https://github.com/IQSS/dataverse/issues/10743