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ISA-tools / OntoMaton

OntoMaton facilitates ontology search and tagging functionalities within Google Spreadsheets.
http://isa-tools.org
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Extend OntoMaton to talk to AgroPortal and SIFR BioPortal #18

Open jonquet opened 7 years ago

jonquet commented 7 years ago

This is a feature request to have an extension of OntoMaton be able to talk to : http://bioportal.lirmm.fr/ API at : http://data.bioportal.lirmm.fr/

and AgroPortal http://agroportal.lirmm.fr/ API at : http://data.agroportal.lirmm.fr/

These API are the same than the NCBO BioPortal one. So it should be quite easy to add the feature to OntoMaton. This will extend possible uses of OntoMaton to French (biomedicine) and Agronomy (english).

The only difference in the /annotator API is the format=rdf and score=... parameters. described in our proxy architecture at: https://github.com/sifrproject/annotators

Which allows us to develop new features for: the SIFR Annotator, the AgroPortal Annotator and the NCBO Annotator at the same time.

For instance, if you want a NCBO Annotator with score you can talk to : http://services.bioportal.lirmm.fr/ncbo_annotatorplus/

agbeltran commented 7 years ago

thanks @jonquet we welcome contributions ;)

jonquet commented 7 years ago

Hi, if you guys (who know the code) tell us where to look at first we can certainly add a few lines to the code and do a pull request.

Adding AgroPortal and SIFR BioPortal should not be more than 2 lines of code (or even better: a property file change).

Please advice.

agbeltran commented 7 years ago

will do