search

ISA-tools / mzml2isa

Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure
GNU General Public License v3.0
12 stars 6 forks source link

New option to allow more control of the out folder #26

Closed Tomnl closed 7 years ago

Tomnl commented 7 years ago

Option (-O) added to allow more control for the user to determine the out folder for the resulting ISA-tab files.

Created after issue #24 from @sneumann

-O (upper case)

Used to explicitly detail the final folder path

mzml2isa -i /in/path/ -O /out/folder/ -s MTBLS121

Will result in the ISA-tab folders being placed in /out/folder/

-o (lower case)

mzml2isa -i /in/path/ -o /out/folder/ -s MTBLS121

The resulting ISA-tab files will be placed in /out/folder/MTBLS121

Note: ignore the previous cancelled pull request