Refactored version of the IU School of Medicine neuroscience connectivity pipeline that executes pre-processing of anatomical, functional, and diffusion Magnetic Resonance Imaging data (written in Python and Bash).
Other
3
stars
2
forks
source link
Issue: subcortical parcellations spreading into the cortex #117
As seen in images in issue #116 the subcortical parcellation has voxels in the cortex. I think this is dues to the dilation that is done on cortical parcellations to fill the GM after transformations to native space. Subcortical masks will probably need to be treated differently, reducing the dilation, or foregoing it all together.
As seen in images in issue #116 the subcortical parcellation has voxels in the cortex. I think this is dues to the dilation that is done on cortical parcellations to fill the GM after transformations to native space. Subcortical masks will probably need to be treated differently, reducing the dilation, or foregoing it all together.