Illumina / ExpansionHunter

A tool for estimating repeat sizes
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Help updating conda recipe #164

Open multimeric opened 2 years ago

multimeric commented 2 years ago

I would like to update the bioconda recipe to include the latest ExpansionHunter release, and indeed I have started work on this here: https://github.com/bioconda/bioconda-recipes/pull/37129.

However, I'm hitting this issue while trying to compile the package:

03:03:17 BIOCONDA INFO (OUT) make[2]: *** [CMakeFiles/Boost.dir/build.make:86: Boost-prefix/src/Boost-stamp/Boost-build] Error 1
03:03:17 BIOCONDA INFO (OUT) make[1]: *** [CMakeFiles/Makefile2:119: CMakeFiles/Boost.dir/all] Error 2

I wonder if anyone has hit this issue, and if so how they resolved it? I suppose it relates to Boost, and probably relates to the way that it is downloaded since 5.0.0. Any ideas how to fix this?

You can see the full log here: https://dev.azure.com/bioconda/bioconda-recipes/_build/results?buildId=21827&view=logs&j=e14e69ff-a0ae-55c4-b71d-229b239cfb2f&t=7df82132-b284-504b-53d6-7d3e63519572&l=15333