Closed brianhill11 closed 5 years ago
The reasoning for this code change was explained in Issue #21 and is meant to handle cases where haploid indel calls are printed as diploid.
See discussion in https://github.com/Illumina/GTCtoVCF/issues/21 this is best left to downstream analysis.
The reasoning for this code change was explained in Issue #21 and is meant to handle cases where haploid indel calls are printed as diploid.