vcf.parser error - Githubissues

Illumina / GTCtoVCF

Script to convert GTC/BPM files to VCF

Apache License 2.0

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vcf.parser error #25

Closed biopelayo closed 5 years ago

biopelayo commented 5 years ago

Hi Ryan: i'm a biologist learning bioinformatics. When using your facility GTCtoVCF i have this error. Could you please help me? I went step by step througt the readme file I really appreciate your advice. Thank you in advance

Pelayo

Traceback (most recent call last): File "./gtc_to_vcf.py", line 9, in from vcf.parser import Writer, Reader ImportError: No module named vcf.parser

KelleyRyanM commented 5 years ago

Hi Pelayo, Have you installed the pyvcf module in your python installation? Do you know which version this is? The README.md file describes how you would do this if you are using anaconda to manage your python installation. -Ryan