Something I'm altering with post-processing, but it'd be nice if the contig order matched the reference given. In my example, the reference is 1-22,X,Y,MT and the program writes contig headers and records as 1-22,MT, X,Y.
If the reference order was maintained I think that would obviate concerns about "human specific" sorting in code.
Something I'm altering with post-processing, but it'd be nice if the contig order matched the reference given. In my example, the reference is 1-22,X,Y,MT and the program writes contig headers and records as 1-22,MT, X,Y.
If the reference order was maintained I think that would obviate concerns about "human specific" sorting in code.
Thanks!