Closed KelleyRyanM closed 5 years ago
Thanks @KelleyRyanM !
I can confirm that 1; semi colons are the ID delimiter and 2; the reference order matches the contig headers and records.
One suggestion. Please add a shebang back into gtc_to_vcf.py #!/usr/bin/env python3
#!/usr/bin/env python3
It's absence threw me off as my first attempt was to run gtc_to_vcf.py directly. Works fine if passing the file to python3.
Thanks @KelleyRyanM !
I can confirm that 1; semi colons are the ID delimiter and 2; the reference order matches the contig headers and records.
One suggestion. Please add a shebang back into gtc_to_vcf.py
#!/usr/bin/env python3It's absence threw me off as my first attempt was to run gtc_to_vcf.py directly. Works fine if passing the file to python3.