Open jjzieve opened 5 years ago
Its suggested in the README to use numpy=1.11. But if its updated to a newer version (e.g. 1.15.2) regression tests will fail due to precision differences when outputting floats (e.g. GQ score).
Example: `AssertionError: '1\t1158675\t1KG_1_1158675\tC\tCCTT\t.\tPASS\t.\tGT:GQ\t0/0:0.43702784\n' != '1\t1158675\t1KG_1_1158675\tC\tCCTT\t.\tPASS\t.\tGT:GQ\t0/0:0.437028\n'
Probable solution:
Its suggested in the README to use numpy=1.11. But if its updated to a newer version (e.g. 1.15.2) regression tests will fail due to precision differences when outputting floats (e.g. GQ score).
Example: `AssertionError: '1\t1158675\t1KG_1_1158675\tC\tCCTT\t.\tPASS\t.\tGT:GQ\t0/0:0.43702784\n' != '1\t1158675\t1KG_1_1158675\tC\tCCTT\t.\tPASS\t.\tGT:GQ\t0/0:0.437028\n'
Probable solution: