Illumina / GTCtoVCF

Script to convert GTC/BPM files to VCF
Apache License 2.0
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Multi gtc #9

Closed KelleyRyanM closed 6 years ago

KelleyRyanM commented 6 years ago

Allow specification of multiple input GTC files on command-line in order to improve analysis time by avoiding repeated loading and instantiation of manifest and other data.

For sample HumanCore dataset, performance is improved from ~50 minutes to ~10 minutes on 48 GTC input files. VCF output files are identical to version 1.0.1