Closed LeeTL1220 closed 3 years ago
Hi Lee,
In the past we haven't made regular releases on DockerHub, just on an ad hoc basis. I'll go ahead and create one for Nirvana 3.14 later today.
@MichaelStromberg Thanks for doing that!
I do not see a 3.14 tag available. I just want to confirm that I am not missing anything...
(https://hub.docker.com/r/annotation/nirvana/tags?page=1&ordering=last_updated)
Hi Lee,
Sorry about that. Here you go: docker pull annotation/nirvana:3.14
In case you ever want to roll your own Nirvana Docker container, here's my Dockerfile: https://github.com/MichaelStromberg-Illumina/DotNetMisc/blob/master/Dockerfiles/Nirvana/Dockerfile
Thank you so much!
@MichaelStromberg Minor issues I noticed:
1) The v3.14 docker image generates discordant version number:
"annotator": "Nirvana 3.13.0",
2) The v3.9.1 VEP datasource is newer than the v3.14 VEP datasource. See release date: 3.9.1:
"dataVersion": "91.26.57",
.......
{
"name": "VEP",
"version": "91",
"description": "BothRefSeqAndEnsembl",
"releaseDate": "2018-03-05"
}
...
v3.14
"dataVersion": "91.27.61",
....
{
"name": "VEP",
"version": "91",
"description": "BothRefSeqAndEnsembl",
"releaseDate": "2017-12-18"
},
...
Hi Lee,
Sorry about that. Here you go:
docker pull annotation/nirvana:3.14
In case you ever want to roll your own Nirvana Docker container, here's my Dockerfile: https://github.com/MichaelStromberg-Illumina/DotNetMisc/blob/master/Dockerfiles/Nirvana/Dockerfile
Any chance that Dockerfile is still available somewhere? Looks like this may have been a private repo? Cheers.
The latest version of Nirvana docker image is 3.9.1, which has diverged from the documentation.
Are you planning to release later versions of Nirvana in a docker image? On dockerhub?
Feel free to close this issue once responding.