How to update dbsnp version?

Illumina / Nirvana

The nimble & robust variant annotator

https://illumina.github.io/NirvanaDocumentation/

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How to update dbsnp version? #98

Closed Griffan closed 1 year ago

Griffan commented 1 year ago

Currently, the downloader will download dbsnp_155 files, is there any plan to update the version? Or how can I manually edit this setting? Thanks!

rajatshuvro commented 1 year ago

Currently the latest version of dbSNP we support is 155. At the moment, there is no way to simply configure the downloader to get a more later version. But you can use our SAUtils tool (https://illumina.github.io/NirvanaDocumentation/utilities/sautils) to generate a more later version of dbSNP. The same is true for any other data sources. Please let me know if you need additional help using SAUtils.

Thanks Rajat