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Illumina / Pisces

Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.
GNU General Public License v3.0
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Gemini 5.2.10.49 crashes #46

Open Varunachander opened 4 years ago

Varunachander commented 4 years ago

Hi,

I encountered an issue in the 5.2.10.49 version with Gemini with the following error. Gemini gave me following error for 3 folders: GL000220, GL000199, GL000216.

/5/19 8:08 PM 1 Exception reported: System.Exception: Application failed: 3 tasks failed. at GeminiMulti.GeminiMultiProcessor.Execute(ICliTaskManager cliTaskManager, Dictionary2 chromRefIds, List1 cmdLineList, ISamtoolsWrapper samtoolsWrapper) at GeminiMulti.Program.ProgramExecution() at CommandLine.Application.BaseApplication`1.Execute().

ERROR: Application failed: 3 tasks failed.

Stack trace: at GeminiMulti.GeminiMultiProcessor.Execute(ICliTaskManager cliTaskManager, Dictionary2 chromRefIds, List1 cmdLineList, ISamtoolsWrapper samtoolsWrapper) at GeminiMulti.Program.ProgramExecution() at CommandLine.Application.BaseApplication`1.Execute() 9/5/19 8:08 PM 1 **** Ending *****

Any thoughts what might be going on? Best, Varuna